Not sure what type of hardware you are using, but on my Dell Poweredge server, there is an option to configure the raid controller when you boot up. This is part of the Self tests and should give you ar pormpt like "Press CTRL - A to configure RAID", or something like that.
If you are using the Raid card to control the read/ write to the drives, then you will install the SME server onto a single hard drive and the controller will handle the rest.
THT
Darin