dave simmons
The fresh install was carried out with a CD I downloaded yesterday
I did restore from backup.
That means that all configuration is also restored. You have in effect created a replica of the server you originally backed up, including users, config & all server manager settings etc.
The only thing missing would be any add on contribs, and these would need to be reinstalled, but the config for those contribs would also have been restored. You said you did not install any extra contribs.
So that means one server has packages based on the 7.2 CD and it performed OK, whereas the other server has 7.2 + the latest updates and it performed problematically. The differences being the packages updated since the 7.2 CD was released. Hmmmm !
Do the uninstall & reinstall mentioned earlier, working around dependency issues that may arise.
I think you can use
rpm -e --force smeserver-spamassassin
I've lost contact with my server as my ISP is having a partial outage, so can't check.
Did you ever receive a message about importing the GPG key as suggested by Mudra & did you run the suggested command ?
Did you run sa-update as suggested earlier ?
Both the above seem to be issues that can cause the problem you are experiencing.
Look thoroughly in your /var/log/qpsmtpd/current log file for evidence that plugins are, or are not, working, and that messages detected as spam are being, or are not being, rejected. Follow through all the events associated with a message ID number.