Paspv
The issue with rkhunter was an ongoing incidence of false positives, causing angst to unknowing users and generating significant requests for support at bugzilla and in forums.
ie it's a nice tool, but the upstream developers were not catering for all scenarios sufficiently well.
Install smeserver-rkhunter from smecontribs if you want, but it will no longer be in the base release of sme. IIRC sme developers are looking at other alternatives.