cattledog
I do not want things to go wrong for you, so I will continue to answer you as you seem a little unsure.
so...the settings that I have made anywhere will be reverted back like a refresh install
Only if you remove (uninstall) contribs, remove custom templates, remove custom db changes you made, & revert any other manual setting changes you may have implemented, along with issuing the post upgrade & reboot commands.
There is also another useful command
initialize-default-databases
see
http://wiki.contribs.org/SME_Server:Adding_Software#Restoring_Default_Yum_Repositoriesbut think wisely before doing that as add on repo info etc that you have manually setup will be deleted
....and all the user profiles will be intact?
Yes, they should be (in a standard functioning server). They are part of the configuration & that information is transferred if you do a backup & restore that includes the standard inclusions, refer
http://wiki.contribs.org/Backup_server_config#Standard_backup_.26_restore_inclusionsIs there away to now just copy over the user passwords and user profiles to the new server? (second server making first one redundant) just want users accounts and nothing more from the old one.
Already answered.
Again, No you cannot selective extract that information, it is in the same set of files that contain, group, pseudonym, ibay, & accounts etc information, & no one has yet created a routine that will extract that. It is not a trivial matter to do this.
Refer to the Backup server config Howto for a general overview of backup & restore
http://wiki.contribs.org/Backup_server_config#Backup_and_Restore_concepts.2C_issues_and_other_informationThere are workarounds described to limit the amount of other data included in a backup eg ibays, but unless you are familiar with sme server & understand what you are doing you could lose or overlook important information that should be transferred eg mysql databases, so proceed carefully & do a test run first if using any of these non standard methods.
For eg see
http://wiki.contribs.org/Backup_server_config#ProcedureThe simplest approach to just transferring user profiles & passwords & basic server settings, is to delete everything else off the server first (in server manager panels), delete ibays, groups, & return any other settings to standard values. Then do the backup & restore, then tweak the new server as required.
You can rerun the admin Console & select Configure this server anytime you want to change main server settings, wan IP etc etc etc. It is quite safe to do this & all data & users etc will be retained, except the settings you are changing of course.