Well I got it working!

Bit of an odd way around it though, here is how I did it:
1. Connected the GPT disk to my own machine and rebooted into Windows 7 64bit.
2. Opened a command window and typed "diskpart" (without quotes obviously) and followed the instructions on which I found to convert the GPT format into MBR.
3. Shutdown my tower and removed the HDD I had just converted, then connecting back into the machine which was to become the new server.
4. Booted the machine with SME Server 8b6 and lo & behold it recognized the drive had been a GPT but with MBR instead.
The OS asked if I wanted it to format and install to GPT & I selected yes. Formatted & installed...
Crossed my fingers that it would boot next time round and voila! It booted to the
wonderful boot menu we all love to see.
Windows can be useful sometimes.
Regards,
Dave